Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845878.1_cds_XP_016509470.1_22401
CDS Infomation

[gene=LOC107826939] [db_xref=GeneID:107826939] [protein=shikimate O-hydroxycinnamoyltransferase-like isoform X2] [protein_id=XP_016509470.1] [location=join(2167..2577,4695..5582)] [gbkey=CDS]
Sequence

ATGAAAATCGTGGTGAAAGAATTAACAATGGTGAAACCAGCAACGGACACACCACAGACA
AACCTGTGGAATTCAAACGTGGATTTGGTAGTGCCAAATTTCCACACCCCAAGTGTTTAC
TTTTACAGGCCATTGTCAGGTGCTTCAAATTTCTTTGATTCAAATGTGCTTAAGGAGGCG
TTGAGTAAAGCGTTAGTGCCGTTTTATCCAATGGCTGGTAGATTAAAAAAGGATGAAGAT
GGACGTATTGAAATTGAATGCAGAGGACAAGGGGTTTTGTTTGTTGAAGCAGAGAGTGAT
GGAACGGTTGATGATTTTGGTGATTTTGCGCCTACTTTGGAACTCCGGCGTCTTATTCCT
GCCGTTGATTATACTCAGGGAATCCATTCTTATGCTCTCCTAGTTTTGCAGATCACTCAT
TTCAAATGCGGGGGAGTTTCCCTCGGTGTGGGCATGCAACATCATGCTGCAGATGGTTTT
TCTGGTCTTCACTTCATCAACGCATGGTCGGACATGGCTCGTGGTATAGACCTCACTATT
CCAACTTTCATTGACCGAACGCTCCTCCGTGCTCGTGATCCACCCTTGCCTCAGTTCCCA
CACATTGAATACCAGCCCCCTCCAACTCTCAATAACATTGCCAAAACTGAAGCAGTTCCT
GAGACTGATGTTTCCATCTTCAAGTTAACCCGTGACCAAATCAATGCCTTGAAAGCCAAG
TCTAAGGAAGATGGAAATACCGTAAATTACAGCTCCTATGAAATGTTAGCAGGACATGTA
TGGCGCTCTACTTGTATGGCACGAGGACTTGAAGAAGATCAAGGAAGCAAGTTGTATATA
GCAACCGATGGGCGTTTTAGGCTTAGGCCTACTCTTCCCCCAGGCTACTTTGGTAATGTG
ATATTTACTGCCACTCCAATTGCAGTGGCTGGTGATCTAAAGTCCAAGCCCATATGGTAT
GCTGCAAGTAAAATTCATGATGCATTGGCTCGGATGGACAATGACTACTTAAGATCAGCA
CTCGATTACTTGGAATTACAGCCCGACCTAAAGGCTCTTGTTCGTGGTGCACATACTTTT
AGGTGCCCAAATCTTGGGATCACTAGTTGGGTTAGGCTGCCTATACACGACGCAGATTTT
GGCTGGGGTAGACCGATATTTATGGGACCTGGTGGTATTGCTTATGAAGGGTTAAGCTTT
ATATTGCCAAGTCCTACCAATGATGGGAGTCTATCCGTTGTTATCTCGCTGCAAGCAGAC
CACATGAAACTTTTCGAGAAATATTTGTATGACATTTGA

Peptide Sequence

PEP ID

XP_016509470.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like isoform X2 [Nicotiana tabacum]
Sequence

MKIVVKELTMVKPATDTPQTNLWNSNVDLVVPNFHTPSVYFYRPLSGASNFFDSNVLKEA
LSKALVPFYPMAGRLKKDEDGRIEIECRGQGVLFVEAESDGTVDDFGDFAPTLELRRLIP
AVDYTQGIHSYALLVLQITHFKCGGVSLGVGMQHHAADGFSGLHFINAWSDMARGIDLTI
PTFIDRTLLRARDPPLPQFPHIEYQPPPTLNNIAKTEAVPETDVSIFKLTRDQINALKAK
SKEDGNTVNYSSYEMLAGHVWRSTCMARGLEEDQGSKLYIATDGRFRLRPTLPPGYFGNV
IFTATPIAVAGDLKSKPIWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTF
RCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSLSVVISLQAD
HMKLFEKYLYDI

Transcript Sequence

Gene sequence data has not been registered.